---
title: Calculating Oligonucleotide Quantity
description: calculating oligo quantity
---

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January 25, 2026

# Calculating Oligonucleotide Quantity

## CALCULATIONS & CONVERSION FACTORS

SPECIFICATIONS SHEET — CALCULATIONS & CONVERSION FACTORS

PURPOSE  
Use these formulas and conversion factors to calculate the quantity and molecular weight  
of synthetic oligonucleotides.

────────────────────────────────────────────────────────  
OD260 MEASUREMENT  
────────────────────────────────────────────────────────  
• The absorbance at 260 nm (OD260) is measured at TWO different dilutions.  
• The OD260 value reported on the specification sheet is the AVERAGE of these two readings.

────────────────────────────────────────────────────────  
QUANTITY CALCULATIONS (FROM OD260)  
────────────────────────────────────────────────────────

CONVERSION FACTOR (SINGLE-STRANDED DNA)  
• 1 OD260 = 33 µg = 0.033 mg

CALCULATIONS  
1\) Milligrams (mg)  
   mg = OD260 × 0.033

2\) Nanomoles (nmol)  
   nmol = (mg ÷ molecular weight) × 10^6

NOTE  
• The molecular weight (MW) for each oligonucleotide is listed on that oligo’s specification sheet.

────────────────────────────────────────────────────────  
MOLECULAR WEIGHT CALCULATION  
(SYNTHETIC OLIGONUCLEOTIDES)  
────────────────────────────────────────────────────────

FORMULA  
Molecular Weight (g/mol) =  
  (251 × nA) +  
  (245 × nT) +  
  (267 × nG) +  
  (230 × nC) +  
  (61 × (n − 1)) +  
  (54 × n) +  
  (17 × (n − 1)) +  
  2

WHERE  
• nA = number of dA bases  
• nT = number of T bases  
• nG = number of dG bases  
• nC = number of dC bases  
• n  = total number of bases in the sequence

TERM DEFINITIONS  
• (61 × (n − 1)) accounts for the molecular weight of the phosphate groups.  
• (54 × n) accounts for hydration of the DNA (≈ 3 water molecules per nucleotide).  
• (17 × (n − 1)) accounts for ammonium cations associated with the phosphate groups.

────────────────────────────────────────────────────────  
SAMPLE CALCULATION  
────────────────────────────────────────────────────────  
Example sequence:  
ATG TAA TGT TTG GTC CGC

Base counts:  
• nA = 3  
• nT = 7  
• nG = 5  
• nC = 3  
• n  = 18

Calculated molecular weight:  
• 6,793 g/mol

────────────────────────────────────────────────────────  
MODIFICATIONS  
────────────────────────────────────────────────────────  
Special modifications (e.g., biotin, 5′ phosphate, inosine, uridine, etc.)  
add additional mass to the oligonucleotide and must be included separately  
when calculating molecular weight.

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